STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bop1Block of proliferation 1. (732 aa)    
Predicted Functional Partners:
Wdr12
WD repeat domain 12.
   
 0.999
Pes1
Pescadillo ribosomal biogenesis factor 1.
   
 0.999
Rsl1d1
Ribosomal L1 domain containing 1.
   
 0.998
Wdr74
WD repeat domain 74.
   
 0.998
Noc2l
NOC2 like nucleolar associated transcriptional repressor.
   
 0.998
Ftsj3
FtsJ RNA methyltransferase homolog 3 (E. coli).
   
 0.997
Mrto4
mRNA turnover 4, ribosome maturation factor.
   
 0.997
Ddx18
DEAD (Asp-Glu-Ala-Asp) box polypeptide 18.
   
 0.996
MGP_SPRETEiJ_P0036887
annotation not available
   
 0.996
Ebna1bp2
EBNA1 binding protein 2.
   
 0.996
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.