STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGP_SPRETEiJ_P0041906annotation not available (145 aa)    
Predicted Functional Partners:
Suv39h1
Suppressor of variegation 3-9 1.
   
 0.989
H3f3a
H3.3 histone A.
    
 0.981
H3f3b
H3.3 histone B.
    
 0.981
Trim28
Tripartite motif-containing 28.
    
 0.980
MGP_SPRETEiJ_P0035441
annotation not available
    
 0.951
MGP_SPRETEiJ_P0035464
annotation not available
    
 0.951
Ehmt2
Euchromatic histone lysine N-methyltransferase 2.
    
 0.934
MGP_SPRETEiJ_P0076688
annotation not available
   
 
0.912
Chaf1a
Chromatin assembly factor 1, subunit A (p150).
    
 
 0.910
Prr14
Proline rich 14.
    
 
 0.885
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.