STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Marf1Meiosis regulator and mRNA stability 1. (1737 aa)    
Predicted Functional Partners:
Fancm
Fanconi anemia, complementation group M.
    
 0.681
Pold2
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 0.674
Smn1
Survival motor neuron 1.
    
 0.647
Pold1
Polymerase (DNA directed), delta 1, catalytic subunit.
   
 0.633
Mus81
MUS81 structure-specific endonuclease subunit.
    
 0.632
Snrpe
Small nuclear ribonucleoprotein E.
   
 0.607
Snrpf
Small nuclear ribonucleoprotein polypeptide F.
    
  0.589
Apaf1
Apoptotic peptidase activating factor 1.
   
 0.576
MGP_SPRETEiJ_P0049432
annotation not available
    
 0.572
Ndufa5
NADH:ubiquinone oxidoreductase subunit A5.
   
 0.564
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.