Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
1700001P01Rik | A930003A15Rik | MGP_SPRETEiJ_P0030989 | MGP_SPRETEiJ_P0042734 | RIKEN cDNA 1700001P01 gene. | RIKEN cDNA A930003A15 gene. | 0.584 |
A930003A15Rik | 1700001P01Rik | MGP_SPRETEiJ_P0042734 | MGP_SPRETEiJ_P0030989 | RIKEN cDNA A930003A15 gene. | RIKEN cDNA 1700001P01 gene. | 0.584 |
A930003A15Rik | Pcare | MGP_SPRETEiJ_P0042734 | MGP_SPRETEiJ_P0047503 | RIKEN cDNA A930003A15 gene. | Photoreceptor cilium actin regulator. | 0.516 |
A930003A15Rik | Pdzph1 | MGP_SPRETEiJ_P0042734 | MGP_SPRETEiJ_P0047325 | RIKEN cDNA A930003A15 gene. | PDZ and pleckstrin homology domains 1. | 0.537 |
Pcare | A930003A15Rik | MGP_SPRETEiJ_P0047503 | MGP_SPRETEiJ_P0042734 | Photoreceptor cilium actin regulator. | RIKEN cDNA A930003A15 gene. | 0.516 |
Pcare | Pdzph1 | MGP_SPRETEiJ_P0047503 | MGP_SPRETEiJ_P0047325 | Photoreceptor cilium actin regulator. | PDZ and pleckstrin homology domains 1. | 0.523 |
Pdzph1 | A930003A15Rik | MGP_SPRETEiJ_P0047325 | MGP_SPRETEiJ_P0042734 | PDZ and pleckstrin homology domains 1. | RIKEN cDNA A930003A15 gene. | 0.537 |
Pdzph1 | Pcare | MGP_SPRETEiJ_P0047325 | MGP_SPRETEiJ_P0047503 | PDZ and pleckstrin homology domains 1. | Photoreceptor cilium actin regulator. | 0.523 |