STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sec22aSEC22 homolog A, vesicle trafficking protein. (307 aa)    
Predicted Functional Partners:
MGP_SPRETEiJ_P0049970
annotation not available
   
 0.973
Bet1
Bet1 golgi vesicular membrane trafficking protein.
   
 0.972
Gosr2
Golgi SNAP receptor complex member 2.
    
 0.960
Scfd1
Sec1 family domain containing 1.
   
 0.957
Ykt6
YKT6 v-SNARE homolog (S. cerevisiae).
    
 0.953
Stx18
Syntaxin 18.
   
 0.946
Vti1a
Vesicle transport through interaction with t-SNAREs 1A.
   
 0.941
Rps6kc1
Ribosomal protein S6 kinase polypeptide 1.
   
 0.939
Gosr1
Golgi SNAP receptor complex member 1.
    
 0.939
Snx15
Sorting nexin 15.
   
 0.939
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.