STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tagln3Transgelin 3. (199 aa)    
Predicted Functional Partners:
Wdr90
WD repeat domain 90.
    
 
 0.849
Acta2
Actin, alpha 2, smooth muscle, aorta.
   
 0.718
Efhb
EF hand domain family, member B.
    
   0.639
Myl9
Myosin, light polypeptide 9, regulatory.
   
 0.623
Wdr1
WD repeat domain 1.
   
 
 0.612
Acta1
Actin, alpha 1, skeletal muscle.
   
 0.608
Pdia2
Protein disulfide isomerase associated 2.
      
 0.606
Tuba4a
Tubulin, alpha 4A.
    
 0.598
MGP_SPRETEiJ_P0033722
annotation not available
    
 0.598
MGP_SPRETEiJ_P0033723
annotation not available
    
 0.598
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.