Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Agr3 | Bricd5 | MGP_SPRETEiJ_P0033627 | MGP_SPRETEiJ_P0044974 | Anterior gradient 3. | BRICHOS domain containing 5. | 0.485 |
Agr3 | Cib3 | MGP_SPRETEiJ_P0033627 | MGP_SPRETEiJ_P0088502 | Anterior gradient 3. | Calcium and integrin binding family member 3. | 0.456 |
Agr3 | Zpld1 | MGP_SPRETEiJ_P0033627 | MGP_SPRETEiJ_P0043729 | Anterior gradient 3. | Zona pellucida like domain containing 1. | 0.470 |
Bricd5 | Agr3 | MGP_SPRETEiJ_P0044974 | MGP_SPRETEiJ_P0033627 | BRICHOS domain containing 5. | Anterior gradient 3. | 0.485 |
Bricd5 | Cib3 | MGP_SPRETEiJ_P0044974 | MGP_SPRETEiJ_P0088502 | BRICHOS domain containing 5. | Calcium and integrin binding family member 3. | 0.487 |
Bricd5 | Zpld1 | MGP_SPRETEiJ_P0044974 | MGP_SPRETEiJ_P0043729 | BRICHOS domain containing 5. | Zona pellucida like domain containing 1. | 0.506 |
Cib3 | Agr3 | MGP_SPRETEiJ_P0088502 | MGP_SPRETEiJ_P0033627 | Calcium and integrin binding family member 3. | Anterior gradient 3. | 0.456 |
Cib3 | Bricd5 | MGP_SPRETEiJ_P0088502 | MGP_SPRETEiJ_P0044974 | Calcium and integrin binding family member 3. | BRICHOS domain containing 5. | 0.487 |
Cib3 | Zpld1 | MGP_SPRETEiJ_P0088502 | MGP_SPRETEiJ_P0043729 | Calcium and integrin binding family member 3. | Zona pellucida like domain containing 1. | 0.473 |
Cttnbp2nl | Prr16 | MGP_SPRETEiJ_P0062113 | MGP_SPRETEiJ_P0048659 | CTTNBP2 N-terminal like. | Proline rich 16. | 0.508 |
Cttnbp2nl | Zpld1 | MGP_SPRETEiJ_P0062113 | MGP_SPRETEiJ_P0043729 | CTTNBP2 N-terminal like. | Zona pellucida like domain containing 1. | 0.445 |
Cuzd1 | Zpld1 | MGP_SPRETEiJ_P0086180 | MGP_SPRETEiJ_P0043729 | CUB and zona pellucida-like domains 1. | Zona pellucida like domain containing 1. | 0.449 |
Dynlrb1 | Dynlrb2 | MGP_SPRETEiJ_P0057609 | MGP_SPRETEiJ_P0089649 | Dynein light chain roadblock-type 1. | Dynein light chain roadblock-type 2. | 0.956 |
Dynlrb1 | Zpld1 | MGP_SPRETEiJ_P0057609 | MGP_SPRETEiJ_P0043729 | Dynein light chain roadblock-type 1. | Zona pellucida like domain containing 1. | 0.552 |
Dynlrb2 | Dynlrb1 | MGP_SPRETEiJ_P0089649 | MGP_SPRETEiJ_P0057609 | Dynein light chain roadblock-type 2. | Dynein light chain roadblock-type 1. | 0.956 |
Dynlrb2 | Zpld1 | MGP_SPRETEiJ_P0089649 | MGP_SPRETEiJ_P0043729 | Dynein light chain roadblock-type 2. | Zona pellucida like domain containing 1. | 0.552 |
Fam162b | Zpld1 | MGP_SPRETEiJ_P0023989 | MGP_SPRETEiJ_P0043729 | Family with sequence similarity 162, member B. | Zona pellucida like domain containing 1. | 0.431 |
MGP_SPRETEiJ_P0057236 | Zpld1 | MGP_SPRETEiJ_P0057236 | MGP_SPRETEiJ_P0043729 | annotation not available | Zona pellucida like domain containing 1. | 0.469 |
Prr16 | Cttnbp2nl | MGP_SPRETEiJ_P0048659 | MGP_SPRETEiJ_P0062113 | Proline rich 16. | CTTNBP2 N-terminal like. | 0.508 |
Prr16 | Zpld1 | MGP_SPRETEiJ_P0048659 | MGP_SPRETEiJ_P0043729 | Proline rich 16. | Zona pellucida like domain containing 1. | 0.519 |
page 1 of 2