Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cbr2 | Cbr3 | MGP_SPRETEiJ_P0033113 | MGP_SPRETEiJ_P0044288 | Carbonyl reductase 2. | Carbonyl reductase 3. | 0.960 |
Cbr2 | Cyp2e1 | MGP_SPRETEiJ_P0033113 | MGP_SPRETEiJ_P0086477 | Carbonyl reductase 2. | Cytochrome P450, family 2, subfamily e, polypeptide 1. | 0.848 |
Cbr2 | Gm5678 | MGP_SPRETEiJ_P0033113 | MGP_SPRETEiJ_P0044287 | Carbonyl reductase 2. | Predicted gene 5678. | 0.946 |
Cbr3 | Cbr2 | MGP_SPRETEiJ_P0044288 | MGP_SPRETEiJ_P0033113 | Carbonyl reductase 3. | Carbonyl reductase 2. | 0.960 |
Cbr3 | Cyp1a1 | MGP_SPRETEiJ_P0044288 | MGP_SPRETEiJ_P0091660 | Carbonyl reductase 3. | Cytochrome P450, family 1, subfamily a, polypeptide 1. | 0.938 |
Cbr3 | Cyp2e1 | MGP_SPRETEiJ_P0044288 | MGP_SPRETEiJ_P0086477 | Carbonyl reductase 3. | Cytochrome P450, family 2, subfamily e, polypeptide 1. | 0.849 |
Cbr3 | Gm5678 | MGP_SPRETEiJ_P0044288 | MGP_SPRETEiJ_P0044287 | Carbonyl reductase 3. | Predicted gene 5678. | 0.871 |
Cbr3 | Ptges | MGP_SPRETEiJ_P0044288 | MGP_SPRETEiJ_P0052937 | Carbonyl reductase 3. | Prostaglandin E synthase. | 0.858 |
Cbr3 | Ptges2 | MGP_SPRETEiJ_P0044288 | MGP_SPRETEiJ_P0053157 | Carbonyl reductase 3. | Prostaglandin E synthase 2. | 0.856 |
Cbr3 | Ptges3 | MGP_SPRETEiJ_P0044288 | MGP_SPRETEiJ_P0026376 | Carbonyl reductase 3. | Prostaglandin E synthase 3. | 0.867 |
Cbr3 | Ugt1a1 | MGP_SPRETEiJ_P0044288 | MGP_SPRETEiJ_P0019987 | Carbonyl reductase 3. | UDP glucuronosyltransferase 1 family, polypeptide A1. | 0.879 |
Cbr3 | Ugt2a3 | MGP_SPRETEiJ_P0044288 | MGP_SPRETEiJ_P0071549 | Carbonyl reductase 3. | UDP glucuronosyltransferase 2 family, polypeptide A3. | 0.861 |
Cbr3 | Ugt2b34 | MGP_SPRETEiJ_P0044288 | MGP_SPRETEiJ_P0071536 | Carbonyl reductase 3. | UDP glucuronosyltransferase 2 family, polypeptide B34. | 0.856 |
Cyp1a1 | Cbr3 | MGP_SPRETEiJ_P0091660 | MGP_SPRETEiJ_P0044288 | Cytochrome P450, family 1, subfamily a, polypeptide 1. | Carbonyl reductase 3. | 0.938 |
Cyp1a1 | Cyp2e1 | MGP_SPRETEiJ_P0091660 | MGP_SPRETEiJ_P0086477 | Cytochrome P450, family 1, subfamily a, polypeptide 1. | Cytochrome P450, family 2, subfamily e, polypeptide 1. | 0.867 |
Cyp1a1 | Gm5678 | MGP_SPRETEiJ_P0091660 | MGP_SPRETEiJ_P0044287 | Cytochrome P450, family 1, subfamily a, polypeptide 1. | Predicted gene 5678. | 0.857 |
Cyp1a1 | Ugt1a1 | MGP_SPRETEiJ_P0091660 | MGP_SPRETEiJ_P0019987 | Cytochrome P450, family 1, subfamily a, polypeptide 1. | UDP glucuronosyltransferase 1 family, polypeptide A1. | 0.984 |
Cyp1a1 | Ugt2a3 | MGP_SPRETEiJ_P0091660 | MGP_SPRETEiJ_P0071549 | Cytochrome P450, family 1, subfamily a, polypeptide 1. | UDP glucuronosyltransferase 2 family, polypeptide A3. | 0.954 |
Cyp1a1 | Ugt2b34 | MGP_SPRETEiJ_P0091660 | MGP_SPRETEiJ_P0071536 | Cytochrome P450, family 1, subfamily a, polypeptide 1. | UDP glucuronosyltransferase 2 family, polypeptide B34. | 0.951 |
Cyp2e1 | Cbr2 | MGP_SPRETEiJ_P0086477 | MGP_SPRETEiJ_P0033113 | Cytochrome P450, family 2, subfamily e, polypeptide 1. | Carbonyl reductase 2. | 0.848 |
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