STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
March2Membrane-associated ring finger (C3HC4) 2. (287 aa)    
Predicted Functional Partners:
Stx6
Syntaxin 6.
    
 
 0.783
Fbxo28
F-box protein 28.
   
    0.697
Cnot2
CCR4-NOT transcription complex, subunit 2.
    
 0.666
March10
Membrane-associated ring finger (C3HC4) 10.
      
 0.577
Spata5
Spermatogenesis associated 5.
    
 0.548
Vcp
Valosin containing protein.
    
 0.548
Rnf215
Ring finger protein 215.
      
 0.497
Faf2
Fas associated factor family member 2.
    
 0.469
Lin7c
Lin-7 homolog C (C. elegans).
    
 
 0.469
Faf1
Fas-associated factor 1.
    
 0.469
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.