STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2-Ab1Histocompatibility 2, class II antigen A, beta 1. (263 aa)    
Predicted Functional Partners:
H2-Aa
Histocompatibility 2, class II antigen A, alpha.
   
0.999
Cd74
annotation not available
   
 0.999
H2-Eb1
Histocompatibility 2, class II antigen E beta.
  
 
 
0.998
H2-Oa
Histocompatibility 2, O region alpha locus.
   
0.989
H2-DMa
Histocompatibility 2, class II, locus DMa.
   
0.989
Cd4
CD4 antigen.
   
 0.960
H2-M3
Histocompatibility 2, M region locus 3.
   
 
0.941
H2-DMb2
Histocompatibility 2, class II, locus Mb2.
   
0.924
MGP_SPRETEiJ_P0046060
annotation not available
   
0.924
H2-Ob
Histocompatibility 2, O region beta locus.
  
 
0.911
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.