STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Egfl8EGF-like domain 8. (293 aa)    
Predicted Functional Partners:
Ppt2
Palmitoyl-protein thioesterase 2.
 
 
  
 0.616
Mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.603
Arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.546
Arid4b
AT rich interactive domain 4B (RBP1-like).
    
 0.546
Prrt1
Proline-rich transmembrane protein 1.
   
 0.509
Dlk2
Delta like non-canonical Notch ligand 2.
      
 0.508
Dip2c
Disco interacting protein 2 homolog C.
    
 0.481
Zbtb22
Zinc finger and BTB domain containing 22.
    
 0.464
Dnaaf5
Dynein, axonemal assembly factor 5.
      
 0.457
Leo1
Leo1, Paf1/RNA polymerase II complex component.
    
  0.455
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.