STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGP_SPRETEiJ_P0047061annotation not available (219 aa)    
Predicted Functional Partners:
Tyrobp
TYRO protein tyrosine kinase binding protein.
   
 0.787
Plxna1
Plexin A1.
    
 0.786
Trem3
Triggering receptor expressed on myeloid cells 3.
     
 0.642
Jchain
Immunoglobulin joining chain.
   
 0.631
Treml1
Triggering receptor expressed on myeloid cells-like 1.
   
 
0.627
Tnr
Tenascin R.
    
 0.553
Tnn
Tenascin N.
    
 0.553
Tnc
Tenascin C.
    
 0.553
Treml2
Triggering receptor expressed on myeloid cells-like 2.
     
 0.530
Olfr198
Olfactory receptor 198.
      
 0.516
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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