Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Heatr1 | Imp4 | MGP_SPRETEiJ_P0035237 | MGP_SPRETEiJ_P0018037 | HEAT repeat containing 1. | IMP4, U3 small nucleolar ribonucleoprotein. | 0.994 |
Heatr1 | Ngdn | MGP_SPRETEiJ_P0035237 | MGP_SPRETEiJ_P0038474 | HEAT repeat containing 1. | Neuroguidin, EIF4E binding protein. | 0.996 |
Heatr1 | Nop58 | MGP_SPRETEiJ_P0035237 | MGP_SPRETEiJ_P0018886 | HEAT repeat containing 1. | NOP58 ribonucleoprotein. | 0.999 |
Heatr1 | Pwp2 | MGP_SPRETEiJ_P0035237 | MGP_SPRETEiJ_P0024796 | HEAT repeat containing 1. | PWP2 periodic tryptophan protein homolog (yeast). | 0.999 |
Heatr1 | Tbl3 | MGP_SPRETEiJ_P0035237 | MGP_SPRETEiJ_P0045018 | HEAT repeat containing 1. | Transducin (beta)-like 3. | 0.999 |
Heatr1 | Utp15 | MGP_SPRETEiJ_P0035237 | MGP_SPRETEiJ_P0036904 | HEAT repeat containing 1. | UTP15 small subunit processome component. | 0.999 |
Heatr1 | Utp18 | MGP_SPRETEiJ_P0035237 | MGP_SPRETEiJ_P0030614 | HEAT repeat containing 1. | UTP18 small subunit processome component. | 0.998 |
Heatr1 | Utp6 | MGP_SPRETEiJ_P0035237 | MGP_SPRETEiJ_P0030062 | HEAT repeat containing 1. | UTP6 small subunit processome component. | 0.998 |
Heatr1 | Wdr43 | MGP_SPRETEiJ_P0035237 | MGP_SPRETEiJ_P0047496 | HEAT repeat containing 1. | WD repeat domain 43. | 0.999 |
Heatr1 | Wdr75 | MGP_SPRETEiJ_P0035237 | MGP_SPRETEiJ_P0018483 | HEAT repeat containing 1. | WD repeat domain 75. | 0.999 |
Imp4 | Heatr1 | MGP_SPRETEiJ_P0018037 | MGP_SPRETEiJ_P0035237 | IMP4, U3 small nucleolar ribonucleoprotein. | HEAT repeat containing 1. | 0.994 |
Imp4 | Ngdn | MGP_SPRETEiJ_P0018037 | MGP_SPRETEiJ_P0038474 | IMP4, U3 small nucleolar ribonucleoprotein. | Neuroguidin, EIF4E binding protein. | 0.999 |
Imp4 | Nop58 | MGP_SPRETEiJ_P0018037 | MGP_SPRETEiJ_P0018886 | IMP4, U3 small nucleolar ribonucleoprotein. | NOP58 ribonucleoprotein. | 0.997 |
Imp4 | Pwp2 | MGP_SPRETEiJ_P0018037 | MGP_SPRETEiJ_P0024796 | IMP4, U3 small nucleolar ribonucleoprotein. | PWP2 periodic tryptophan protein homolog (yeast). | 0.999 |
Imp4 | Tbl3 | MGP_SPRETEiJ_P0018037 | MGP_SPRETEiJ_P0045018 | IMP4, U3 small nucleolar ribonucleoprotein. | Transducin (beta)-like 3. | 0.999 |
Imp4 | Utp15 | MGP_SPRETEiJ_P0018037 | MGP_SPRETEiJ_P0036904 | IMP4, U3 small nucleolar ribonucleoprotein. | UTP15 small subunit processome component. | 0.996 |
Imp4 | Utp18 | MGP_SPRETEiJ_P0018037 | MGP_SPRETEiJ_P0030614 | IMP4, U3 small nucleolar ribonucleoprotein. | UTP18 small subunit processome component. | 0.999 |
Imp4 | Utp6 | MGP_SPRETEiJ_P0018037 | MGP_SPRETEiJ_P0030062 | IMP4, U3 small nucleolar ribonucleoprotein. | UTP6 small subunit processome component. | 0.999 |
Imp4 | Wdr43 | MGP_SPRETEiJ_P0018037 | MGP_SPRETEiJ_P0047496 | IMP4, U3 small nucleolar ribonucleoprotein. | WD repeat domain 43. | 0.999 |
Imp4 | Wdr75 | MGP_SPRETEiJ_P0018037 | MGP_SPRETEiJ_P0018483 | IMP4, U3 small nucleolar ribonucleoprotein. | WD repeat domain 75. | 0.997 |
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