STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WacWW domain containing adaptor with coiled-coil. (624 aa)    
Predicted Functional Partners:
Rnf40
Ring finger protein 40.
   
 0.936
MGP_SPRETEiJ_P0034259
annotation not available
   
 0.935
Rnf20
Ring finger protein 20.
   
 0.923
U2af2
U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2.
    
 0.884
Snrpe
Small nuclear ribonucleoprotein E.
    
  0.880
MGP_SPRETEiJ_P0045484
annotation not available
    
 0.876
Prpf39
pre-mRNA processing factor 39.
    
 0.860
Sf3b2
Splicing factor 3b, subunit 2.
   
 0.853
Sf3b3
Splicing factor 3b, subunit 3.
    
 0.852
Ddx46
DEAD (Asp-Glu-Ala-Asp) box polypeptide 46.
   
 0.847
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.