STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kctd1Potassium channel tetramerisation domain containing 1. (861 aa)    
Predicted Functional Partners:
Ube2i
Ubiquitin-conjugating enzyme E2I.
    
 
 0.861
MGP_SPRETEiJ_P0032358
annotation not available
    
 
0.826
Tfap2a
Transcription factor AP-2, alpha.
    
 0.794
Tfap2c
Transcription factor AP-2, gamma.
    
 0.743
Tfap2d
Transcription factor AP-2, delta.
    
 0.732
Tfap2b
Transcription factor AP-2 beta.
    
 0.715
Tfap2e
Transcription factor AP-2, epsilon.
    
 0.681
Btbd10
BTB (POZ) domain containing 10.
      
 0.555
Kctd5
Potassium channel tetramerisation domain containing 5.
      
 0.516
Atf7ip
Activating transcription factor 7 interacting protein.
 
    
 0.443
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.