STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zmat2Zinc finger, matrin type 2. (199 aa)    
Predicted Functional Partners:
MGP_SPRETEiJ_P0056283
annotation not available
   
 0.997
Sart1
Squamous cell carcinoma antigen recognized by T cells 1.
    
 0.996
Snrnp200
Small nuclear ribonucleoprotein 200 (U5).
   
 0.996
Lsm7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.995
Prpf38a
PRP38 pre-mRNA processing factor 38 (yeast) domain containing A.
   
 0.994
MGP_SPRETEiJ_P0025175
annotation not available
   
 0.993
Prpf6
pre-mRNA splicing factor 6.
   
 0.993
Prpf3
pre-mRNA processing factor 3.
   
 0.993
Eftud2
Elongation factor Tu GTP binding domain containing 2.
   
 0.992
Prpf4
pre-mRNA processing factor 4.
   
  0.992
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.