Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Armcx4 | Sh3rf2 | MGP_SPRETEiJ_P0096444 | MGP_SPRETEiJ_P0048534 | Armadillo repeat containing, X-linked 4. | SH3 domain containing ring finger 2. | 0.436 |
Armcx4 | Trappc12 | MGP_SPRETEiJ_P0096444 | MGP_SPRETEiJ_P0033509 | Armadillo repeat containing, X-linked 4. | Trafficking protein particle complex 12. | 0.408 |
Gas7 | Sh3rf2 | MGP_SPRETEiJ_P0028729 | MGP_SPRETEiJ_P0048534 | Growth arrest specific 7. | SH3 domain containing ring finger 2. | 0.417 |
Npnt | Rhpn1 | MGP_SPRETEiJ_P0062986 | MGP_SPRETEiJ_P0040323 | Nephronectin. | Rhophilin, Rho GTPase binding protein 1. | 0.456 |
Npnt | Sh3rf2 | MGP_SPRETEiJ_P0062986 | MGP_SPRETEiJ_P0048534 | Nephronectin. | SH3 domain containing ring finger 2. | 0.472 |
Npnt | Tenm4 | MGP_SPRETEiJ_P0062986 | MGP_SPRETEiJ_P0084051 | Nephronectin. | Teneurin transmembrane protein 4. | 0.463 |
Npnt | Trappc12 | MGP_SPRETEiJ_P0062986 | MGP_SPRETEiJ_P0033509 | Nephronectin. | Trafficking protein particle complex 12. | 0.472 |
Nrp2 | Rhpn1 | MGP_SPRETEiJ_P0018974 | MGP_SPRETEiJ_P0040323 | Neuropilin 2. | Rhophilin, Rho GTPase binding protein 1. | 0.459 |
Nrp2 | Sh3rf2 | MGP_SPRETEiJ_P0018974 | MGP_SPRETEiJ_P0048534 | Neuropilin 2. | SH3 domain containing ring finger 2. | 0.467 |
Nrp2 | Trappc12 | MGP_SPRETEiJ_P0018974 | MGP_SPRETEiJ_P0033509 | Neuropilin 2. | Trafficking protein particle complex 12. | 0.467 |
Olfr310 | Sh3rf2 | MGP_SPRETEiJ_P0083923 | MGP_SPRETEiJ_P0048534 | Olfactory receptor 310. | SH3 domain containing ring finger 2. | 0.509 |
Pdcd6ip | Sh3rf2 | MGP_SPRETEiJ_P0094166 | MGP_SPRETEiJ_P0048534 | Programmed cell death 6 interacting protein. | SH3 domain containing ring finger 2. | 0.477 |
Plac8l1 | Sh3rf2 | MGP_SPRETEiJ_P0048538 | MGP_SPRETEiJ_P0048534 | PLAC8-like 1. | SH3 domain containing ring finger 2. | 0.432 |
Rhpn1 | Npnt | MGP_SPRETEiJ_P0040323 | MGP_SPRETEiJ_P0062986 | Rhophilin, Rho GTPase binding protein 1. | Nephronectin. | 0.456 |
Rhpn1 | Nrp2 | MGP_SPRETEiJ_P0040323 | MGP_SPRETEiJ_P0018974 | Rhophilin, Rho GTPase binding protein 1. | Neuropilin 2. | 0.459 |
Rhpn1 | Sh3rf2 | MGP_SPRETEiJ_P0040323 | MGP_SPRETEiJ_P0048534 | Rhophilin, Rho GTPase binding protein 1. | SH3 domain containing ring finger 2. | 0.498 |
Rhpn1 | Tenm4 | MGP_SPRETEiJ_P0040323 | MGP_SPRETEiJ_P0084051 | Rhophilin, Rho GTPase binding protein 1. | Teneurin transmembrane protein 4. | 0.461 |
Rhpn1 | Trappc12 | MGP_SPRETEiJ_P0040323 | MGP_SPRETEiJ_P0033509 | Rhophilin, Rho GTPase binding protein 1. | Trafficking protein particle complex 12. | 0.467 |
Sh3rf2 | Armcx4 | MGP_SPRETEiJ_P0048534 | MGP_SPRETEiJ_P0096444 | SH3 domain containing ring finger 2. | Armadillo repeat containing, X-linked 4. | 0.436 |
Sh3rf2 | Gas7 | MGP_SPRETEiJ_P0048534 | MGP_SPRETEiJ_P0028729 | SH3 domain containing ring finger 2. | Growth arrest specific 7. | 0.417 |
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