STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sec11cSEC11 homolog C, signal peptidase complex subunit. (192 aa)    
Predicted Functional Partners:
Spcs2
Signal peptidase complex subunit 2 homolog (S. cerevisiae).
   
 0.997
Spcs1
Signal peptidase complex subunit 1 homolog (S. cerevisiae).
   
 0.994
Spcs3
Signal peptidase complex subunit 3 homolog (S. cerevisiae).
   
 0.992
MGP_SPRETEiJ_P0083787
annotation not available
  
  
0.959
MGP_SPRETEiJ_P0096502
annotation not available
   
 0.955
Kptn
Kaptin.
    
 0.787
Szt2
SZT2 subunit of KICSTOR complex.
    
 0.774
Depdc5
DEP domain containing 5.
    
 0.743
Wdr24
WD repeat domain 24.
    
 0.728
Wdr59
WD repeat domain 59.
    
 0.721
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.