STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CtifCBP80/20-dependent translation initiation factor. (623 aa)    
Predicted Functional Partners:
Slbp
Stem-loop binding protein.
    
 0.965
Mif4gd
MIF4G domain containing.
    
  
0.773
MGP_SPRETEiJ_P0089543
annotation not available
    
 
 0.677
Zfp536
Zinc finger protein 536.
      
 0.668
MGP_SPRETEiJ_P0089547
annotation not available
    
   0.661
Ddx25
DEAD (Asp-Glu-Ala-Asp) box polypeptide 25.
    
   0.661
Tshz3
Teashirt zinc finger family member 3.
      
 0.659
Clint1
Clathrin interactor 1.
      
 0.630
Ncbp1
Nuclear cap binding protein subunit 1.
      
 0.614
Enox1
ecto-NOX disulfide-thiol exchanger 1.
      
 0.517
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.