STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Actn3Actinin alpha 3. (900 aa)    
Predicted Functional Partners:
Tnnt3
Troponin T3, skeletal, fast.
   
 
 0.984
Actn2
Actinin alpha 2.
  
0.951
Tnni2
Troponin I, skeletal, fast 2.
   
 0.930
Atp2a1
ATPase, Ca++ transporting, cardiac muscle, fast twitch 1.
   
  
 0.922
Tnnc2
Troponin C2, fast.
   
 0.919
Myl1
Myosin, light polypeptide 1.
   
 0.892
MGP_SPRETEiJ_P0085796
annotation not available
   
 0.888
Vcl
Vinculin.
   
 0.886
MGP_SPRETEiJ_P0028714
annotation not available
   
 0.867
Tnni1
Troponin I, skeletal, slow 1.
   
 0.841
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.