STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sorbs1Sorbin and SH3 domain containing 1. (938 aa)    
Predicted Functional Partners:
Vcl
Vinculin.
   
 0.982
Cbl
Casitas B-lineage lymphoma.
    
 0.961
Flot1
Flotillin 1.
    
 0.928
Afdn
Afadin, adherens junction formation factor.
    
 0.917
Vta1
Vesicle (multivesicular body) trafficking 1.
    
   0.852
Gch1
GTP cyclohydrolase 1.
    
   0.852
Flot2
Flotillin 2.
    
 0.842
Ctnnb1
Catenin (cadherin associated protein), beta 1.
    
 0.822
Ctnna1
Catenin (cadherin associated protein), alpha 1.
    
 0.807
Tln1
Talin 1.
   
 
 0.804
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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