STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGP_SPRETEiJ_P0050959annotation not available (547 aa)    
Predicted Functional Partners:
Cul1
Cullin 1.
    
 0.880
Skp1a
S-phase kinase-associated protein 1A.
    
 0.863
Cul3
Cullin 3.
    
  0.730
Fbxw5
F-box and WD-40 domain protein 5.
     
 0.695
Cacul1
CDK2 associated, cullin domain 1.
    
  0.676
Txndc9
Thioredoxin domain containing 9.
    
   0.662
Cct5
Chaperonin containing Tcp1, subunit 5 (epsilon).
    
  0.656
Fbxw2
F-box and WD-40 domain protein 2.
     
 0.629
Pdcl3
Phosducin-like 3.
    
   0.624
Rbx1
Ring-box 1.
     
 0.616
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.