Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cul3 | Gli1 | MGP_SPRETEiJ_P0019645 | MGP_SPRETEiJ_P0026290 | Cullin 3. | GLI-Kruppel family member GLI1. | 0.957 |
Cul3 | Gli2 | MGP_SPRETEiJ_P0019645 | MGP_SPRETEiJ_P0020489 | Cullin 3. | GLI-Kruppel family member GLI2. | 0.957 |
Cul3 | Gli3 | MGP_SPRETEiJ_P0019645 | MGP_SPRETEiJ_P0035290 | Cullin 3. | GLI-Kruppel family member GLI3. | 0.956 |
Cul3 | Gsk3b | MGP_SPRETEiJ_P0019645 | MGP_SPRETEiJ_P0043440 | Cullin 3. | Glycogen synthase kinase 3 beta. | 0.768 |
Cul3 | Sufu | MGP_SPRETEiJ_P0019645 | MGP_SPRETEiJ_P0051046 | Cullin 3. | SUFU negative regulator of hedgehog signaling. | 0.957 |
Gli1 | Cul3 | MGP_SPRETEiJ_P0026290 | MGP_SPRETEiJ_P0019645 | GLI-Kruppel family member GLI1. | Cullin 3. | 0.957 |
Gli1 | Gli2 | MGP_SPRETEiJ_P0026290 | MGP_SPRETEiJ_P0020489 | GLI-Kruppel family member GLI1. | GLI-Kruppel family member GLI2. | 0.973 |
Gli1 | Gli3 | MGP_SPRETEiJ_P0026290 | MGP_SPRETEiJ_P0035290 | GLI-Kruppel family member GLI1. | GLI-Kruppel family member GLI3. | 0.939 |
Gli1 | Gsk3b | MGP_SPRETEiJ_P0026290 | MGP_SPRETEiJ_P0043440 | GLI-Kruppel family member GLI1. | Glycogen synthase kinase 3 beta. | 0.794 |
Gli1 | Kif7 | MGP_SPRETEiJ_P0026290 | MGP_SPRETEiJ_P0083607 | GLI-Kruppel family member GLI1. | Kinesin family member 7. | 0.990 |
Gli1 | Smo | MGP_SPRETEiJ_P0026290 | MGP_SPRETEiJ_P0075824 | GLI-Kruppel family member GLI1. | Smoothened, frizzled class receptor. | 0.948 |
Gli1 | Stk36 | MGP_SPRETEiJ_P0026290 | MGP_SPRETEiJ_P0019344 | GLI-Kruppel family member GLI1. | Serine/threonine kinase 36. | 0.909 |
Gli1 | Sufu | MGP_SPRETEiJ_P0026290 | MGP_SPRETEiJ_P0051046 | GLI-Kruppel family member GLI1. | SUFU negative regulator of hedgehog signaling. | 0.999 |
Gli1 | Ulk3 | MGP_SPRETEiJ_P0026290 | MGP_SPRETEiJ_P0091654 | GLI-Kruppel family member GLI1. | Unc-51-like kinase 3. | 0.637 |
Gli2 | Cul3 | MGP_SPRETEiJ_P0020489 | MGP_SPRETEiJ_P0019645 | GLI-Kruppel family member GLI2. | Cullin 3. | 0.957 |
Gli2 | Gli1 | MGP_SPRETEiJ_P0020489 | MGP_SPRETEiJ_P0026290 | GLI-Kruppel family member GLI2. | GLI-Kruppel family member GLI1. | 0.973 |
Gli2 | Gli3 | MGP_SPRETEiJ_P0020489 | MGP_SPRETEiJ_P0035290 | GLI-Kruppel family member GLI2. | GLI-Kruppel family member GLI3. | 0.944 |
Gli2 | Gsk3b | MGP_SPRETEiJ_P0020489 | MGP_SPRETEiJ_P0043440 | GLI-Kruppel family member GLI2. | Glycogen synthase kinase 3 beta. | 0.823 |
Gli2 | Kif7 | MGP_SPRETEiJ_P0020489 | MGP_SPRETEiJ_P0083607 | GLI-Kruppel family member GLI2. | Kinesin family member 7. | 0.991 |
Gli2 | Smo | MGP_SPRETEiJ_P0020489 | MGP_SPRETEiJ_P0075824 | GLI-Kruppel family member GLI2. | Smoothened, frizzled class receptor. | 0.928 |
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