STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cacnb2Calcium channel, voltage-dependent, beta 2 subunit. (655 aa)    
Predicted Functional Partners:
Cacna1d
Calcium channel, voltage-dependent, L type, alpha 1D subunit.
   
 0.999
Cacna1c
Calcium channel, voltage-dependent, L type, alpha 1C subunit.
   
 0.999
Cacna2d1
Calcium channel, voltage-dependent, alpha2/delta subunit 1.
    
 0.997
Cacna1s
Calcium channel, voltage-dependent, L type, alpha 1S subunit.
   
 0.996
Cacna1a
Calcium channel, voltage-dependent, P/Q type, alpha 1A subunit.
   
 0.993
Cacna1b
Calcium channel, voltage-dependent, N type, alpha 1B subunit.
   
 0.990
Cacnb3
Calcium channel, voltage-dependent, beta 3 subunit.
  
 
0.985
Cacna1f
Calcium channel, voltage-dependent, alpha 1F subunit.
   
 0.985
Cacna1e
Calcium channel, voltage-dependent, R type, alpha 1E subunit.
   
 0.984
Cacnb1
Calcium channel, voltage-dependent, beta 1 subunit.
  
 
0.984
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.