STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kcnt1Potassium channel, subfamily T, member 1. (1239 aa)    
Predicted Functional Partners:
Kcnmb4
Potassium large conductance calcium-activated channel, subfamily M, beta member 4.
    
 0.855
Kcnmb3
Potassium large conductance calcium-activated channel, subfamily M, beta member 3.
    
 0.825
Kcnmb1
Potassium large conductance calcium-activated channel, subfamily M, beta member 1.
    
 0.815
Scn1a
Sodium channel, voltage-gated, type I, alpha.
   
 
 0.595
Scn8a
Sodium channel, voltage-gated, type VIII, alpha.
   
 
 0.591
Scn2a
Sodium channel, voltage-gated, type II, alpha.
   
 
 0.591
Kcnmb2
Potassium large conductance calcium-activated channel, subfamily M, beta member 2.
    
 0.559
Kcna2
Potassium voltage-gated channel, shaker-related subfamily, member 2.
   
  
 0.552
Kcnq2
Potassium voltage-gated channel, subfamily Q, member 2.
      
 0.540
MGP_SPRETEiJ_P0054095
annotation not available
   
 
 0.536
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.