STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CercamCerebral endothelial cell adhesion molecule. (592 aa)    
Predicted Functional Partners:
Plod3
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3.
   
0.697
Plod1
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1.
   
0.665
Plod2
Procollagen lysine, 2-oxoglutarate 5-dioxygenase 2.
   
0.661
Col6a2
Collagen, type VI, alpha 2.
   
 0.587
Col17a1
Collagen, type XVII, alpha 1.
    
  0.554
Col8a1
Collagen, type VIII, alpha 1.
    
  0.530
Col8a2
Collagen, type VIII, alpha 2.
    
  0.522
Col23a1
Collagen, type XXIII, alpha 1.
    
  0.514
Col2a1
Collagen, type II, alpha 1.
    
  0.511
Col24a1
Collagen, type XXIV, alpha 1.
    
  0.499
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.