STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rtn4rl2Reticulon 4 receptor-like 2. (426 aa)    
Predicted Functional Partners:
Rtn4
Reticulon 4.
    
 0.878
Adgrl2
Adhesion G protein-coupled receptor L2.
    
   0.816
Adgrl3
Adhesion G protein-coupled receptor L3.
    
   0.816
Adgrl1
Adhesion G protein-coupled receptor L1.
    
 
 0.816
Mag
Myelin-associated glycoprotein.
    
 
 0.776
Tnfrsf19
Tumor necrosis factor receptor superfamily, member 19.
      
 0.637
MGP_SPRETEiJ_P0080379
annotation not available
      
 0.610
Ptprs
Protein tyrosine phosphatase, receptor type, S.
    
 0.570
Ntng1
Netrin G1.
    
 0.547
Erbb3
Erb-b2 receptor tyrosine kinase 3.
    
 0.525
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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