Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Adgrl1 | Rtn4rl2 | MGP_SPRETEiJ_P0088687 | MGP_SPRETEiJ_P0054746 | Adhesion G protein-coupled receptor L1. | Reticulon 4 receptor-like 2. | 0.816 |
Adgrl2 | Rtn4rl2 | MGP_SPRETEiJ_P0063432 | MGP_SPRETEiJ_P0054746 | Adhesion G protein-coupled receptor L2. | Reticulon 4 receptor-like 2. | 0.816 |
Adgrl3 | Rtn4rl2 | MGP_SPRETEiJ_P0071472 | MGP_SPRETEiJ_P0054746 | Adhesion G protein-coupled receptor L3. | Reticulon 4 receptor-like 2. | 0.816 |
Erbb3 | Mag | MGP_SPRETEiJ_P0026468 | MGP_SPRETEiJ_P0082137 | Erb-b2 receptor tyrosine kinase 3. | Myelin-associated glycoprotein. | 0.401 |
Erbb3 | Ptprs | MGP_SPRETEiJ_P0026468 | MGP_SPRETEiJ_P0047228 | Erb-b2 receptor tyrosine kinase 3. | Protein tyrosine phosphatase, receptor type, S. | 0.424 |
Erbb3 | Rtn4rl2 | MGP_SPRETEiJ_P0026468 | MGP_SPRETEiJ_P0054746 | Erb-b2 receptor tyrosine kinase 3. | Reticulon 4 receptor-like 2. | 0.525 |
MGP_SPRETEiJ_P0080379 | Mag | MGP_SPRETEiJ_P0080379 | MGP_SPRETEiJ_P0082137 | annotation not available | Myelin-associated glycoprotein. | 0.733 |
MGP_SPRETEiJ_P0080379 | Rtn4 | MGP_SPRETEiJ_P0080379 | MGP_SPRETEiJ_P0027338 | annotation not available | Reticulon 4. | 0.657 |
MGP_SPRETEiJ_P0080379 | Rtn4rl2 | MGP_SPRETEiJ_P0080379 | MGP_SPRETEiJ_P0054746 | annotation not available | Reticulon 4 receptor-like 2. | 0.610 |
Mag | Erbb3 | MGP_SPRETEiJ_P0082137 | MGP_SPRETEiJ_P0026468 | Myelin-associated glycoprotein. | Erb-b2 receptor tyrosine kinase 3. | 0.401 |
Mag | MGP_SPRETEiJ_P0080379 | MGP_SPRETEiJ_P0082137 | MGP_SPRETEiJ_P0080379 | Myelin-associated glycoprotein. | annotation not available | 0.733 |
Mag | Ptprs | MGP_SPRETEiJ_P0082137 | MGP_SPRETEiJ_P0047228 | Myelin-associated glycoprotein. | Protein tyrosine phosphatase, receptor type, S. | 0.488 |
Mag | Rtn4 | MGP_SPRETEiJ_P0082137 | MGP_SPRETEiJ_P0027338 | Myelin-associated glycoprotein. | Reticulon 4. | 0.962 |
Mag | Rtn4rl2 | MGP_SPRETEiJ_P0082137 | MGP_SPRETEiJ_P0054746 | Myelin-associated glycoprotein. | Reticulon 4 receptor-like 2. | 0.776 |
Mag | Tnfrsf19 | MGP_SPRETEiJ_P0082137 | MGP_SPRETEiJ_P0038773 | Myelin-associated glycoprotein. | Tumor necrosis factor receptor superfamily, member 19. | 0.655 |
Ntng1 | Rtn4rl2 | MGP_SPRETEiJ_P0062439 | MGP_SPRETEiJ_P0054746 | Netrin G1. | Reticulon 4 receptor-like 2. | 0.547 |
Ptprs | Erbb3 | MGP_SPRETEiJ_P0047228 | MGP_SPRETEiJ_P0026468 | Protein tyrosine phosphatase, receptor type, S. | Erb-b2 receptor tyrosine kinase 3. | 0.424 |
Ptprs | Mag | MGP_SPRETEiJ_P0047228 | MGP_SPRETEiJ_P0082137 | Protein tyrosine phosphatase, receptor type, S. | Myelin-associated glycoprotein. | 0.488 |
Ptprs | Rtn4 | MGP_SPRETEiJ_P0047228 | MGP_SPRETEiJ_P0027338 | Protein tyrosine phosphatase, receptor type, S. | Reticulon 4. | 0.683 |
Ptprs | Rtn4rl2 | MGP_SPRETEiJ_P0047228 | MGP_SPRETEiJ_P0054746 | Protein tyrosine phosphatase, receptor type, S. | Reticulon 4 receptor-like 2. | 0.570 |
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