STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGP_SPRETEiJ_P0055303annotation not available (509 aa)    
Predicted Functional Partners:
Setmar
SET domain without mariner transposase fusion.
    
 0.535
Sh3rf3
SH3 domain containing ring finger 3.
    
 0.480
Tmem87a
Transmembrane protein 87A.
      
 0.457
Spo11
SPO11 meiotic protein covalently bound to DSB.
     
 0.456
Prdm16
PR domain containing 16.
    
 
 0.455
Sh3pxd2b
SH3 and PX domains 2B.
    
  0.424
Ncf4
Neutrophil cytosolic factor 4.
    
  0.424
Noxo1
NADPH oxidase organizer 1.
    
  0.424
Sh3pxd2a
SH3 and PX domains 2A.
    
  0.424
Ncf1
Neutrophil cytosolic factor 1.
    
  0.424
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.