STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGP_SPRETEiJ_P0055548annotation not available (555 aa)    
Predicted Functional Partners:
Zswim7
Zinc finger SWIM-type containing 7.
    
 0.992
Brca2
Breast cancer 2, early onset.
     
 0.932
Fancd2
Fanconi anemia, complementation group D2.
     
 0.912
Msh2
mutS homolog 2.
     
 0.911
Msh6
mutS homolog 6.
     
 0.911
Brca1
Breast cancer 1, early onset.
     
 0.910
Palb2
Partner and localizer of BRCA2.
     
 0.908
Ercc4
Excision repair cross-complementing rodent repair deficiency, complementation group 4.
     
 0.899
Msh3
mutS homolog 3.
     
 0.778
Spidr
Scaffolding protein involved in DNA repair.
    
 
 0.765
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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