STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pla2g4fPhospholipase A2, group IVF. (855 aa)    
Predicted Functional Partners:
Alox15
Arachidonate 15-lipoxygenase.
     
 0.959
Alox12b
Arachidonate 12-lipoxygenase, 12R type.
     
 0.949
Alox5
Arachidonate 5-lipoxygenase.
     
 0.949
Alox8
Arachidonate 8-lipoxygenase.
     
 0.947
Mapk3
Mitogen-activated protein kinase 3.
    
 0.944
Cyp2u1
Cytochrome P450, family 2, subfamily u, polypeptide 1.
     
 0.940
Prkcb
Protein kinase C, beta.
    
 0.938
Plcg2
Phospholipase C, gamma 2.
     
 0.938
Plcg1
Phospholipase C, gamma 1.
     
 0.936
Gnas
GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus.
     
 0.936
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.