STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Atp8b4ATPase, class I, type 8B, member 4. (1194 aa)    
Predicted Functional Partners:
Tmem30b
Transmembrane protein 30B.
   
 0.971
Tmem30a
Transmembrane protein 30A.
   
 0.971
Atp11b
ATPase, class VI, type 11B.
  
  
 
0.904
Atp11c
ATPase, class VI, type 11C.
  
  
 
0.904
Atp8b2
ATPase, class I, type 8B, member 2.
  
 
 
0.903
Atp11a
ATPase, class VI, type 11A.
  
  
 
0.903
Atp8b1
ATPase, class I, type 8B, member 1.
  
  
 
0.901
Atp8a1
ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1.
  
  
 
0.901
Tmem30c
Transmembrane protein 30C.
   
 0.864
Depdc7
DEP domain containing 7.
      
 0.757
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.