STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AtrnAttractin. (1429 aa)    
Predicted Functional Partners:
Mgrn1
Mahogunin, ring finger 1.
   
 
 0.835
a
Nonagouti.
    
 
 0.720
Pafah1b1
Platelet-activating factor acetylhydrolase, isoform 1b, subunit 1.
    
 0.665
Tbc1d31
TBC1 domain family, member 31.
    
 0.665
Mc4r
Melanocortin 4 receptor.
    
 
 0.565
Pced1a
PC-esterase domain containing 1A.
      
 0.516
Mc1r
Melanocortin 1 receptor.
      
 0.516
Rnf157
Ring finger protein 157.
   
 
 0.510
Ceacam16
Carcinoembryonic antigen-related cell adhesion molecule 16.
    
 
 0.510
Scarf1
Scavenger receptor class F, member 1.
      
 0.507
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.