Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ankrd16 | Dtd1 | MGP_SPRETEiJ_P0051619 | MGP_SPRETEiJ_P0057128 | Ankyrin repeat domain 16. | D-tyrosyl-tRNA deacylase 1. | 0.516 |
Ankrd16 | Dtd2 | MGP_SPRETEiJ_P0051619 | MGP_SPRETEiJ_P0033738 | Ankyrin repeat domain 16. | D-tyrosyl-tRNA deacylase 2. | 0.436 |
Ddx43 | Dtd1 | MGP_SPRETEiJ_P0092451 | MGP_SPRETEiJ_P0057128 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 43. | D-tyrosyl-tRNA deacylase 1. | 0.633 |
Dtd1 | Ankrd16 | MGP_SPRETEiJ_P0057128 | MGP_SPRETEiJ_P0051619 | D-tyrosyl-tRNA deacylase 1. | Ankyrin repeat domain 16. | 0.516 |
Dtd1 | Ddx43 | MGP_SPRETEiJ_P0057128 | MGP_SPRETEiJ_P0092451 | D-tyrosyl-tRNA deacylase 1. | DEAD (Asp-Glu-Ala-Asp) box polypeptide 43. | 0.633 |
Dtd1 | Dtd2 | MGP_SPRETEiJ_P0057128 | MGP_SPRETEiJ_P0033738 | D-tyrosyl-tRNA deacylase 1. | D-tyrosyl-tRNA deacylase 2. | 0.689 |
Dtd1 | Hddc3 | MGP_SPRETEiJ_P0057128 | MGP_SPRETEiJ_P0083708 | D-tyrosyl-tRNA deacylase 1. | HD domain containing 3. | 0.489 |
Dtd1 | MGP_SPRETEiJ_P0017897 | MGP_SPRETEiJ_P0057128 | MGP_SPRETEiJ_P0017897 | D-tyrosyl-tRNA deacylase 1. | annotation not available | 0.426 |
Dtd1 | Slc17a5 | MGP_SPRETEiJ_P0057128 | MGP_SPRETEiJ_P0092462 | D-tyrosyl-tRNA deacylase 1. | Solute carrier family 17 (anion/sugar transporter), member 5. | 0.508 |
Dtd1 | Yars | MGP_SPRETEiJ_P0057128 | MGP_SPRETEiJ_P0067089 | D-tyrosyl-tRNA deacylase 1. | tyrosyl-tRNA synthetase. | 0.645 |
Dtd2 | Ankrd16 | MGP_SPRETEiJ_P0033738 | MGP_SPRETEiJ_P0051619 | D-tyrosyl-tRNA deacylase 2. | Ankyrin repeat domain 16. | 0.436 |
Dtd2 | Dtd1 | MGP_SPRETEiJ_P0033738 | MGP_SPRETEiJ_P0057128 | D-tyrosyl-tRNA deacylase 2. | D-tyrosyl-tRNA deacylase 1. | 0.689 |
Dtd2 | Hddc3 | MGP_SPRETEiJ_P0033738 | MGP_SPRETEiJ_P0083708 | D-tyrosyl-tRNA deacylase 2. | HD domain containing 3. | 0.489 |
Dtd2 | Yars | MGP_SPRETEiJ_P0033738 | MGP_SPRETEiJ_P0067089 | D-tyrosyl-tRNA deacylase 2. | tyrosyl-tRNA synthetase. | 0.645 |
Hddc3 | Dtd1 | MGP_SPRETEiJ_P0083708 | MGP_SPRETEiJ_P0057128 | HD domain containing 3. | D-tyrosyl-tRNA deacylase 1. | 0.489 |
Hddc3 | Dtd2 | MGP_SPRETEiJ_P0083708 | MGP_SPRETEiJ_P0033738 | HD domain containing 3. | D-tyrosyl-tRNA deacylase 2. | 0.489 |
Hddc3 | Yars | MGP_SPRETEiJ_P0083708 | MGP_SPRETEiJ_P0067089 | HD domain containing 3. | tyrosyl-tRNA synthetase. | 0.640 |
MGP_SPRETEiJ_P0017897 | Dtd1 | MGP_SPRETEiJ_P0017897 | MGP_SPRETEiJ_P0057128 | annotation not available | D-tyrosyl-tRNA deacylase 1. | 0.426 |
MGP_SPRETEiJ_P0017897 | Slc17a5 | MGP_SPRETEiJ_P0017897 | MGP_SPRETEiJ_P0092462 | annotation not available | Solute carrier family 17 (anion/sugar transporter), member 5. | 0.446 |
Slc17a5 | Dtd1 | MGP_SPRETEiJ_P0092462 | MGP_SPRETEiJ_P0057128 | Solute carrier family 17 (anion/sugar transporter), member 5. | D-tyrosyl-tRNA deacylase 1. | 0.508 |
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