Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cylc1 | Hsf2bp | MGP_SPRETEiJ_P0096297 | MGP_SPRETEiJ_P0045780 | Cylicin, basic protein of sperm head cytoskeleton 1. | Heat shock transcription factor 2 binding protein. | 0.511 |
Cylc1 | Tcfl5 | MGP_SPRETEiJ_P0096297 | MGP_SPRETEiJ_P0058831 | Cylicin, basic protein of sperm head cytoskeleton 1. | Transcription factor-like 5 (basic helix-loop-helix). | 0.426 |
Hsf2bp | Cylc1 | MGP_SPRETEiJ_P0045780 | MGP_SPRETEiJ_P0096297 | Heat shock transcription factor 2 binding protein. | Cylicin, basic protein of sperm head cytoskeleton 1. | 0.511 |
Hsf2bp | Tcfl5 | MGP_SPRETEiJ_P0045780 | MGP_SPRETEiJ_P0058831 | Heat shock transcription factor 2 binding protein. | Transcription factor-like 5 (basic helix-loop-helix). | 0.428 |
Osbpl2 | Tcfl5 | MGP_SPRETEiJ_P0058782 | MGP_SPRETEiJ_P0058831 | Oxysterol binding protein-like 2. | Transcription factor-like 5 (basic helix-loop-helix). | 0.426 |
Tcfl5 | Cylc1 | MGP_SPRETEiJ_P0058831 | MGP_SPRETEiJ_P0096297 | Transcription factor-like 5 (basic helix-loop-helix). | Cylicin, basic protein of sperm head cytoskeleton 1. | 0.426 |
Tcfl5 | Hsf2bp | MGP_SPRETEiJ_P0058831 | MGP_SPRETEiJ_P0045780 | Transcription factor-like 5 (basic helix-loop-helix). | Heat shock transcription factor 2 binding protein. | 0.428 |
Tcfl5 | Osbpl2 | MGP_SPRETEiJ_P0058831 | MGP_SPRETEiJ_P0058782 | Transcription factor-like 5 (basic helix-loop-helix). | Oxysterol binding protein-like 2. | 0.426 |
Tcfl5 | Zfp740 | MGP_SPRETEiJ_P0058831 | MGP_SPRETEiJ_P0041795 | Transcription factor-like 5 (basic helix-loop-helix). | Zinc finger protein 740. | 0.448 |
Zfp740 | Tcfl5 | MGP_SPRETEiJ_P0041795 | MGP_SPRETEiJ_P0058831 | Zinc finger protein 740. | Transcription factor-like 5 (basic helix-loop-helix). | 0.448 |