Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cd7 | Lime1 | MGP_SPRETEiJ_P0033162 | MGP_SPRETEiJ_P0058969 | CD7 antigen. | Lck interacting transmembrane adaptor 1. | 0.421 |
Grap | Grb2 | MGP_SPRETEiJ_P0028522 | MGP_SPRETEiJ_P0032430 | GRB2-related adaptor protein. | Growth factor receptor bound protein 2. | 0.947 |
Grap | Lck | MGP_SPRETEiJ_P0028522 | MGP_SPRETEiJ_P0067134 | GRB2-related adaptor protein. | Lymphocyte protein tyrosine kinase. | 0.409 |
Grap | Lime1 | MGP_SPRETEiJ_P0028522 | MGP_SPRETEiJ_P0058969 | GRB2-related adaptor protein. | Lck interacting transmembrane adaptor 1. | 0.679 |
Grap | Syk | MGP_SPRETEiJ_P0028522 | MGP_SPRETEiJ_P0035995 | GRB2-related adaptor protein. | Spleen tyrosine kinase. | 0.410 |
Grap | Zap70 | MGP_SPRETEiJ_P0028522 | MGP_SPRETEiJ_P0018166 | GRB2-related adaptor protein. | Zeta-chain (TCR) associated protein kinase. | 0.580 |
Grap2 | Grb2 | MGP_SPRETEiJ_P0040851 | MGP_SPRETEiJ_P0032430 | GRB2-related adaptor protein 2. | Growth factor receptor bound protein 2. | 0.968 |
Grap2 | Lck | MGP_SPRETEiJ_P0040851 | MGP_SPRETEiJ_P0067134 | GRB2-related adaptor protein 2. | Lymphocyte protein tyrosine kinase. | 0.847 |
Grap2 | Lime1 | MGP_SPRETEiJ_P0040851 | MGP_SPRETEiJ_P0058969 | GRB2-related adaptor protein 2. | Lck interacting transmembrane adaptor 1. | 0.679 |
Grap2 | Syk | MGP_SPRETEiJ_P0040851 | MGP_SPRETEiJ_P0035995 | GRB2-related adaptor protein 2. | Spleen tyrosine kinase. | 0.868 |
Grap2 | Zap70 | MGP_SPRETEiJ_P0040851 | MGP_SPRETEiJ_P0018166 | GRB2-related adaptor protein 2. | Zeta-chain (TCR) associated protein kinase. | 0.938 |
Grb2 | Grap | MGP_SPRETEiJ_P0032430 | MGP_SPRETEiJ_P0028522 | Growth factor receptor bound protein 2. | GRB2-related adaptor protein. | 0.947 |
Grb2 | Grap2 | MGP_SPRETEiJ_P0032430 | MGP_SPRETEiJ_P0040851 | Growth factor receptor bound protein 2. | GRB2-related adaptor protein 2. | 0.968 |
Grb2 | Lck | MGP_SPRETEiJ_P0032430 | MGP_SPRETEiJ_P0067134 | Growth factor receptor bound protein 2. | Lymphocyte protein tyrosine kinase. | 0.940 |
Grb2 | Lime1 | MGP_SPRETEiJ_P0032430 | MGP_SPRETEiJ_P0058969 | Growth factor receptor bound protein 2. | Lck interacting transmembrane adaptor 1. | 0.649 |
Grb2 | Syk | MGP_SPRETEiJ_P0032430 | MGP_SPRETEiJ_P0035995 | Growth factor receptor bound protein 2. | Spleen tyrosine kinase. | 0.923 |
Grb2 | Zap70 | MGP_SPRETEiJ_P0032430 | MGP_SPRETEiJ_P0018166 | Growth factor receptor bound protein 2. | Zeta-chain (TCR) associated protein kinase. | 0.958 |
Ints6l | Lime1 | MGP_SPRETEiJ_P0095228 | MGP_SPRETEiJ_P0058969 | Integrator complex subunit 6 like. | Lck interacting transmembrane adaptor 1. | 0.520 |
Ints6l | MGP_SPRETEiJ_P0069058 | MGP_SPRETEiJ_P0095228 | MGP_SPRETEiJ_P0069058 | Integrator complex subunit 6 like. | annotation not available | 0.617 |
Ints6l | Nfxl1 | MGP_SPRETEiJ_P0095228 | MGP_SPRETEiJ_P0071180 | Integrator complex subunit 6 like. | Nuclear transcription factor, X-box binding-like 1. | 0.508 |
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