Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ddc | Ido1 | MGP_SPRETEiJ_P0027043 | MGP_SPRETEiJ_P0087464 | Dopa decarboxylase. | Indoleamine 2,3-dioxygenase 1. | 0.921 |
Ddc | Ido2 | MGP_SPRETEiJ_P0027043 | MGP_SPRETEiJ_P0087460 | Dopa decarboxylase. | Indoleamine 2,3-dioxygenase 2. | 0.921 |
Ddc | Il4i1 | MGP_SPRETEiJ_P0027043 | MGP_SPRETEiJ_P0082695 | Dopa decarboxylase. | Interleukin 4 induced 1. | 0.911 |
Ddc | Lao1 | MGP_SPRETEiJ_P0027043 | MGP_SPRETEiJ_P0066548 | Dopa decarboxylase. | L-amino acid oxidase 1. | 0.937 |
Ddc | MGP_SPRETEiJ_P0032741 | MGP_SPRETEiJ_P0027043 | MGP_SPRETEiJ_P0032741 | Dopa decarboxylase. | annotation not available | 0.941 |
Ddc | Tat | MGP_SPRETEiJ_P0027043 | MGP_SPRETEiJ_P0089498 | Dopa decarboxylase. | Tyrosine aminotransferase. | 0.950 |
Ddc | Tdo2 | MGP_SPRETEiJ_P0027043 | MGP_SPRETEiJ_P0060427 | Dopa decarboxylase. | Tryptophan 2,3-dioxygenase. | 0.945 |
Ddc | Tph1 | MGP_SPRETEiJ_P0027043 | MGP_SPRETEiJ_P0083027 | Dopa decarboxylase. | Tryptophan hydroxylase 1. | 0.975 |
Ddc | Tph2 | MGP_SPRETEiJ_P0027043 | MGP_SPRETEiJ_P0026000 | Dopa decarboxylase. | Tryptophan hydroxylase 2. | 0.972 |
Ido1 | Ddc | MGP_SPRETEiJ_P0087464 | MGP_SPRETEiJ_P0027043 | Indoleamine 2,3-dioxygenase 1. | Dopa decarboxylase. | 0.921 |
Ido1 | Ido2 | MGP_SPRETEiJ_P0087464 | MGP_SPRETEiJ_P0087460 | Indoleamine 2,3-dioxygenase 1. | Indoleamine 2,3-dioxygenase 2. | 0.913 |
Ido1 | Il4i1 | MGP_SPRETEiJ_P0087464 | MGP_SPRETEiJ_P0082695 | Indoleamine 2,3-dioxygenase 1. | Interleukin 4 induced 1. | 0.928 |
Ido1 | Kynu | MGP_SPRETEiJ_P0087464 | MGP_SPRETEiJ_P0053677 | Indoleamine 2,3-dioxygenase 1. | Kynureninase. | 0.974 |
Ido1 | Lao1 | MGP_SPRETEiJ_P0087464 | MGP_SPRETEiJ_P0066548 | Indoleamine 2,3-dioxygenase 1. | L-amino acid oxidase 1. | 0.939 |
Ido1 | MGP_SPRETEiJ_P0032741 | MGP_SPRETEiJ_P0087464 | MGP_SPRETEiJ_P0032741 | Indoleamine 2,3-dioxygenase 1. | annotation not available | 0.955 |
Ido1 | Tat | MGP_SPRETEiJ_P0087464 | MGP_SPRETEiJ_P0089498 | Indoleamine 2,3-dioxygenase 1. | Tyrosine aminotransferase. | 0.403 |
Ido1 | Tdo2 | MGP_SPRETEiJ_P0087464 | MGP_SPRETEiJ_P0060427 | Indoleamine 2,3-dioxygenase 1. | Tryptophan 2,3-dioxygenase. | 0.980 |
Ido1 | Tph1 | MGP_SPRETEiJ_P0087464 | MGP_SPRETEiJ_P0083027 | Indoleamine 2,3-dioxygenase 1. | Tryptophan hydroxylase 1. | 0.958 |
Ido1 | Tph2 | MGP_SPRETEiJ_P0087464 | MGP_SPRETEiJ_P0026000 | Indoleamine 2,3-dioxygenase 1. | Tryptophan hydroxylase 2. | 0.942 |
Ido2 | Ddc | MGP_SPRETEiJ_P0087460 | MGP_SPRETEiJ_P0027043 | Indoleamine 2,3-dioxygenase 2. | Dopa decarboxylase. | 0.921 |
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