STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cdc42se1CDC42 small effector 1. (80 aa)    
Predicted Functional Partners:
Cdc42ep4
CDC42 effector protein (Rho GTPase binding) 4.
      
 0.473
Baiap2l1
BAI1-associated protein 2-like 1.
      
 0.461
Cdc42bpb
CDC42 binding protein kinase beta.
      
 0.457
Cdc42
Cell division cycle 42.
    
 
 0.455
Btbd10
BTB (POZ) domain containing 10.
   
  
 0.452
Flii
Flightless I actin binding protein.
      
 0.428
Syngap1
Synaptic Ras GTPase activating protein 1 homolog (rat).
      
 0.400
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.