STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Casp6Caspase 6. (279 aa)    
Predicted Functional Partners:
Casp8
Caspase 8.
   
0.987
Casp9
Caspase 9.
    
0.973
Lmna
Lamin A.
    
 0.964
Casp1
Caspase 1.
   
0.960
MGP_SPRETEiJ_P0074762
annotation not available
    
 0.958
Apaf1
Apoptotic peptidase activating factor 1.
    
 0.951
Lmnb1
Lamin B1.
    
 0.949
Lmnb2
Lamin B2.
    
 0.948
Casp7
Caspase 7.
    
0.941
Vim
Vimentin.
    
 0.918
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.