STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NpntNephronectin. (609 aa)    
Predicted Functional Partners:
Itga8
Integrin alpha 8.
   
 0.974
Itgb1
Integrin beta 1 (fibronectin receptor beta).
     
 0.897
Frem1
Fras1 related extracellular matrix protein 1.
     
 0.877
Frem3
Fras1 related extracellular matrix protein 3.
     
 0.780
Fras1
Fraser extracellular matrix complex subunit 1.
     
 0.766
Frem2
Fras1 related extracellular matrix protein 2.
     
 0.729
Itga2b
Integrin alpha 2b.
   
 0.726
Gstcd
Glutathione S-transferase, C-terminal domain containing.
     
 0.712
Itga5
Integrin alpha 5 (fibronectin receptor alpha).
   
 0.573
Itgav
Integrin alpha V.
   
 0.573
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.