STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dpy19l4Dpy-19-like 4 (C. elegans). (722 aa)    
Predicted Functional Partners:
2610301B20Rik
RIKEN cDNA 2610301B20 gene.
      
 0.602
Ccnq
Cyclin Q.
      
 0.479
Tmem117
Transmembrane protein 117.
      
 0.456
Tmem141
Transmembrane protein 141.
      
 0.456
Mex3d
Mex3 RNA binding family member D.
      
 0.450
Vwa7
Von Willebrand factor A domain containing 7.
      
 0.447
Noc4l
NOC4 like.
      
 0.445
Casc1
Cancer susceptibility candidate 1.
   
    0.445
Tmtc3
Transmembrane and tetratricopeptide repeat containing 3.
   
  
 0.437
Ankrd33b
Ankyrin repeat domain 33B.
   
 0.437
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.