Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
4933405O20Rik | Acly | MGP_SPRETEiJ_P0083145 | MGP_SPRETEiJ_P0031286 | RIKEN cDNA 4933405O20 gene. | ATP citrate lyase. | 0.641 |
4933405O20Rik | Aco1 | MGP_SPRETEiJ_P0083145 | MGP_SPRETEiJ_P0064202 | RIKEN cDNA 4933405O20 gene. | Aconitase 1. | 0.963 |
4933405O20Rik | Cs | MGP_SPRETEiJ_P0083145 | MGP_SPRETEiJ_P0026429 | RIKEN cDNA 4933405O20 gene. | Citrate synthase. | 0.743 |
4933405O20Rik | Csl | MGP_SPRETEiJ_P0083145 | MGP_SPRETEiJ_P0025863 | RIKEN cDNA 4933405O20 gene. | Citrate synthase like. | 0.743 |
4933405O20Rik | Idh1 | MGP_SPRETEiJ_P0083145 | MGP_SPRETEiJ_P0019073 | RIKEN cDNA 4933405O20 gene. | Isocitrate dehydrogenase 1 (NADP+), soluble. | 0.983 |
4933405O20Rik | Idh2 | MGP_SPRETEiJ_P0083145 | MGP_SPRETEiJ_P0083638 | RIKEN cDNA 4933405O20 gene. | Isocitrate dehydrogenase 2 (NADP+), mitochondrial. | 0.984 |
4933405O20Rik | Idh3a | MGP_SPRETEiJ_P0083145 | MGP_SPRETEiJ_P0091510 | RIKEN cDNA 4933405O20 gene. | Isocitrate dehydrogenase 3 (NAD+) alpha. | 0.998 |
4933405O20Rik | Idh3b | MGP_SPRETEiJ_P0083145 | MGP_SPRETEiJ_P0056703 | RIKEN cDNA 4933405O20 gene. | Isocitrate dehydrogenase 3 (NAD+) beta. | 0.995 |
4933405O20Rik | Idh3g | MGP_SPRETEiJ_P0083145 | MGP_SPRETEiJ_P0095470 | RIKEN cDNA 4933405O20 gene. | Isocitrate dehydrogenase 3 (NAD+), gamma. | 0.937 |
Acly | 4933405O20Rik | MGP_SPRETEiJ_P0031286 | MGP_SPRETEiJ_P0083145 | ATP citrate lyase. | RIKEN cDNA 4933405O20 gene. | 0.641 |
Acly | Aco1 | MGP_SPRETEiJ_P0031286 | MGP_SPRETEiJ_P0064202 | ATP citrate lyase. | Aconitase 1. | 0.970 |
Acly | Cs | MGP_SPRETEiJ_P0031286 | MGP_SPRETEiJ_P0026429 | ATP citrate lyase. | Citrate synthase. | 0.987 |
Acly | Csl | MGP_SPRETEiJ_P0031286 | MGP_SPRETEiJ_P0025863 | ATP citrate lyase. | Citrate synthase like. | 0.985 |
Acly | Idh1 | MGP_SPRETEiJ_P0031286 | MGP_SPRETEiJ_P0019073 | ATP citrate lyase. | Isocitrate dehydrogenase 1 (NADP+), soluble. | 0.880 |
Acly | Idh2 | MGP_SPRETEiJ_P0031286 | MGP_SPRETEiJ_P0083638 | ATP citrate lyase. | Isocitrate dehydrogenase 2 (NADP+), mitochondrial. | 0.880 |
Acly | Idh3a | MGP_SPRETEiJ_P0031286 | MGP_SPRETEiJ_P0091510 | ATP citrate lyase. | Isocitrate dehydrogenase 3 (NAD+) alpha. | 0.623 |
Acly | Idh3b | MGP_SPRETEiJ_P0031286 | MGP_SPRETEiJ_P0056703 | ATP citrate lyase. | Isocitrate dehydrogenase 3 (NAD+) beta. | 0.641 |
Acly | Idh3g | MGP_SPRETEiJ_P0031286 | MGP_SPRETEiJ_P0095470 | ATP citrate lyase. | Isocitrate dehydrogenase 3 (NAD+), gamma. | 0.641 |
Aco1 | 4933405O20Rik | MGP_SPRETEiJ_P0064202 | MGP_SPRETEiJ_P0083145 | Aconitase 1. | RIKEN cDNA 4933405O20 gene. | 0.963 |
Aco1 | Acly | MGP_SPRETEiJ_P0064202 | MGP_SPRETEiJ_P0031286 | Aconitase 1. | ATP citrate lyase. | 0.970 |
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