STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Raver2Ribonucleoprotein, PTB-binding 2. (673 aa)    
Predicted Functional Partners:
Eprs
glutamyl-prolyl-tRNA synthetase.
   
 0.952
Vcl
Vinculin.
    
 
 0.884
Cherp
Calcium homeostasis endoplasmic reticulum protein.
   
    0.720
Ptbp3
Polypyrimidine tract binding protein 3.
   
 0.697
Ptbp2
Polypyrimidine tract binding protein 2.
   
 0.690
Fau
Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived).
    
   0.683
MGP_SPRETEiJ_P0049674
annotation not available
    
   0.683
MGP_SPRETEiJ_P0065358
annotation not available
   
   0.582
Ncbp2
Nuclear cap binding protein subunit 2.
    
  0.577
Hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.574
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.