Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bsnd | Usp24 | MGP_SPRETEiJ_P0065753 | MGP_SPRETEiJ_P0065747 | Barttin CLCNK type accessory beta subunit. | Ubiquitin specific peptidase 24. | 0.755 |
Ddb2 | MGP_SPRETEiJ_P0078726 | MGP_SPRETEiJ_P0055140 | MGP_SPRETEiJ_P0078726 | Damage specific DNA binding protein 2. | annotation not available | 0.507 |
Ddb2 | Rps27a | MGP_SPRETEiJ_P0055140 | MGP_SPRETEiJ_P0027332 | Damage specific DNA binding protein 2. | Ribosomal protein S27A. | 0.699 |
Ddb2 | Trp53 | MGP_SPRETEiJ_P0055140 | MGP_SPRETEiJ_P0028933 | Damage specific DNA binding protein 2. | Transformation related protein 53. | 0.981 |
Ddb2 | Usp24 | MGP_SPRETEiJ_P0055140 | MGP_SPRETEiJ_P0065747 | Damage specific DNA binding protein 2. | Ubiquitin specific peptidase 24. | 0.984 |
Ints8 | Rps27a | MGP_SPRETEiJ_P0063856 | MGP_SPRETEiJ_P0027332 | Integrator complex subunit 8. | Ribosomal protein S27A. | 0.535 |
Ints8 | Smad4 | MGP_SPRETEiJ_P0063856 | MGP_SPRETEiJ_P0049055 | Integrator complex subunit 8. | SMAD family member 4. | 0.878 |
Ints8 | Usp24 | MGP_SPRETEiJ_P0063856 | MGP_SPRETEiJ_P0065747 | Integrator complex subunit 8. | Ubiquitin specific peptidase 24. | 0.636 |
Itsn2 | MGP_SPRETEiJ_P0078726 | MGP_SPRETEiJ_P0033303 | MGP_SPRETEiJ_P0078726 | Intersectin 2. | annotation not available | 0.666 |
Itsn2 | Map3k7 | MGP_SPRETEiJ_P0033303 | MGP_SPRETEiJ_P0064067 | Intersectin 2. | Mitogen-activated protein kinase kinase kinase 7. | 0.677 |
Itsn2 | Rps27a | MGP_SPRETEiJ_P0033303 | MGP_SPRETEiJ_P0027332 | Intersectin 2. | Ribosomal protein S27A. | 0.666 |
Itsn2 | Usp24 | MGP_SPRETEiJ_P0033303 | MGP_SPRETEiJ_P0065747 | Intersectin 2. | Ubiquitin specific peptidase 24. | 0.806 |
MGP_SPRETEiJ_P0078726 | Ddb2 | MGP_SPRETEiJ_P0078726 | MGP_SPRETEiJ_P0055140 | annotation not available | Damage specific DNA binding protein 2. | 0.507 |
MGP_SPRETEiJ_P0078726 | Itsn2 | MGP_SPRETEiJ_P0078726 | MGP_SPRETEiJ_P0033303 | annotation not available | Intersectin 2. | 0.666 |
MGP_SPRETEiJ_P0078726 | Map3k7 | MGP_SPRETEiJ_P0078726 | MGP_SPRETEiJ_P0064067 | annotation not available | Mitogen-activated protein kinase kinase kinase 7. | 0.413 |
MGP_SPRETEiJ_P0078726 | Rps27a | MGP_SPRETEiJ_P0078726 | MGP_SPRETEiJ_P0027332 | annotation not available | Ribosomal protein S27A. | 0.999 |
MGP_SPRETEiJ_P0078726 | Trip12 | MGP_SPRETEiJ_P0078726 | MGP_SPRETEiJ_P0019740 | annotation not available | Thyroid hormone receptor interactor 12. | 0.937 |
MGP_SPRETEiJ_P0078726 | Usp24 | MGP_SPRETEiJ_P0078726 | MGP_SPRETEiJ_P0065747 | annotation not available | Ubiquitin specific peptidase 24. | 0.722 |
Map3k7 | Itsn2 | MGP_SPRETEiJ_P0064067 | MGP_SPRETEiJ_P0033303 | Mitogen-activated protein kinase kinase kinase 7. | Intersectin 2. | 0.677 |
Map3k7 | MGP_SPRETEiJ_P0078726 | MGP_SPRETEiJ_P0064067 | MGP_SPRETEiJ_P0078726 | Mitogen-activated protein kinase kinase kinase 7. | annotation not available | 0.413 |
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