STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Usp24Ubiquitin specific peptidase 24. (2617 aa)    
Predicted Functional Partners:
Ddb2
Damage specific DNA binding protein 2.
    
 0.984
Map3k7
Mitogen-activated protein kinase kinase kinase 7.
   
  0.877
Trip12
Thyroid hormone receptor interactor 12.
   
 
 0.809
Itsn2
Intersectin 2.
   
 
  0.806
Bsnd
Barttin CLCNK type accessory beta subunit.
      
 0.755
MGP_SPRETEiJ_P0078726
annotation not available
    
  0.722
Smad4
SMAD family member 4.
    
 0.701
Trp53
Transformation related protein 53.
    
 0.670
Rps27a
Ribosomal protein S27A.
    
  0.642
Ints8
Integrator complex subunit 8.
  
 
  0.636
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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