Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C130073F10Rik | Skint7 | MGP_SPRETEiJ_P0065650 | MGP_SPRETEiJ_P0066124 | RIKEN cDNA C130073F10 gene. | Selection and upkeep of intraepithelial T cells 7. | 0.440 |
Cpa6 | MGP_SPRETEiJ_P0070336 | MGP_SPRETEiJ_P0017694 | MGP_SPRETEiJ_P0070336 | Carboxypeptidase A6. | annotation not available | 0.891 |
Cpa6 | Skint7 | MGP_SPRETEiJ_P0017694 | MGP_SPRETEiJ_P0066124 | Carboxypeptidase A6. | Selection and upkeep of intraepithelial T cells 7. | 0.810 |
Gas7 | Skint7 | MGP_SPRETEiJ_P0028729 | MGP_SPRETEiJ_P0066124 | Growth arrest specific 7. | Selection and upkeep of intraepithelial T cells 7. | 0.417 |
MGP_SPRETEiJ_P0059603 | Skint7 | MGP_SPRETEiJ_P0059603 | MGP_SPRETEiJ_P0066124 | annotation not available | Selection and upkeep of intraepithelial T cells 7. | 0.528 |
MGP_SPRETEiJ_P0070336 | Cpa6 | MGP_SPRETEiJ_P0070336 | MGP_SPRETEiJ_P0017694 | annotation not available | Carboxypeptidase A6. | 0.891 |
MGP_SPRETEiJ_P0070336 | Skint7 | MGP_SPRETEiJ_P0070336 | MGP_SPRETEiJ_P0066124 | annotation not available | Selection and upkeep of intraepithelial T cells 7. | 0.667 |
Skint7 | C130073F10Rik | MGP_SPRETEiJ_P0066124 | MGP_SPRETEiJ_P0065650 | Selection and upkeep of intraepithelial T cells 7. | RIKEN cDNA C130073F10 gene. | 0.440 |
Skint7 | Cpa6 | MGP_SPRETEiJ_P0066124 | MGP_SPRETEiJ_P0017694 | Selection and upkeep of intraepithelial T cells 7. | Carboxypeptidase A6. | 0.810 |
Skint7 | Gas7 | MGP_SPRETEiJ_P0066124 | MGP_SPRETEiJ_P0028729 | Selection and upkeep of intraepithelial T cells 7. | Growth arrest specific 7. | 0.417 |
Skint7 | MGP_SPRETEiJ_P0059603 | MGP_SPRETEiJ_P0066124 | MGP_SPRETEiJ_P0059603 | Selection and upkeep of intraepithelial T cells 7. | annotation not available | 0.528 |
Skint7 | MGP_SPRETEiJ_P0070336 | MGP_SPRETEiJ_P0066124 | MGP_SPRETEiJ_P0070336 | Selection and upkeep of intraepithelial T cells 7. | annotation not available | 0.667 |