STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zswim5Zinc finger SWIM-type containing 5. (1188 aa)    
Predicted Functional Partners:
Fem1b
Fem 1 homolog b.
     
 0.562
Cul2
Cullin 2.
     
 0.542
Zswim8
Zinc finger SWIM-type containing 8.
     
0.541
BC004004
cDNA sequence BC004004.
      
 0.508
Gm16286
Predicted gene 16286.
      
 0.508
Klhdc10
Kelch domain containing 10.
     
 0.506
MGP_SPRETEiJ_P0030352
annotation not available
   
 
  0.504
Zer1
Zyg-11 related, cell cycle regulator.
     
 0.504
Zswim9
Zinc finger SWIM-type containing 9.
      
 0.497
Eloc
Elongin C.
    
 0.484
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.