STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppt1Palmitoyl-protein thioesterase 1. (306 aa)    
Predicted Functional Partners:
Ppt2
Palmitoyl-protein thioesterase 2.
     
0.942
MGP_SPRETEiJ_P0067302
annotation not available
     
 0.936
Acsl3
acyl-CoA synthetase long-chain family member 3.
     
 0.879
Acsl4
acyl-CoA synthetase long-chain family member 4.
     
 0.879
Acsl6
acyl-CoA synthetase long-chain family member 6.
     
 0.872
Acsbg2
acyl-CoA synthetase bubblegum family member 2.
     
 0.872
Acsbg3
acyl-CoA synthetase bubblegum family member 3.
     
 0.872
Acsl1
acyl-CoA synthetase long-chain family member 1.
     
 0.872
Acsbg1
acyl-CoA synthetase bubblegum family member 1.
     
 0.872
Cln3
Ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease).
    
 
 0.751
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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