STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mfsd2aMajor facilitator superfamily domain containing 2A. (534 aa)    
Predicted Functional Partners:
MGP_SPRETEiJ_P0038980
annotation not available
    
 
 0.781
MGP_SPRETEiJ_P0038981
annotation not available
    
 
 0.781
Syna
Syncytin a.
    
 
 0.781
MGP_SPRETEiJ_P0069743
annotation not available
    
  0.689
Cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
    
  0.671
Ago2
Argonaute RISC catalytic subunit 2.
      
 0.607
Gm12117
Predicted gene 12117.
    
 0.586
Pnmal2
PNMA-like 2.
    
 0.586
Gapdhs
Glyceraldehyde-3-phosphate dehydrogenase, spermatogenic.
    
 0.586
MGP_SPRETEiJ_P0091447
annotation not available
    
 0.586
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.