Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MGP_SPRETEiJ_P0083073 | Txlna | MGP_SPRETEiJ_P0083073 | MGP_SPRETEiJ_P0067180 | annotation not available | Taxilin alpha. | 0.691 |
Stx11 | Stx2 | MGP_SPRETEiJ_P0023389 | MGP_SPRETEiJ_P0073711 | Syntaxin 11. | Syntaxin 2. | 0.788 |
Stx11 | Stx3 | MGP_SPRETEiJ_P0023389 | MGP_SPRETEiJ_P0050231 | Syntaxin 11. | Syntaxin 3. | 0.847 |
Stx11 | Stx4a | MGP_SPRETEiJ_P0023389 | MGP_SPRETEiJ_P0085948 | Syntaxin 11. | Syntaxin 4A (placental). | 0.797 |
Stx11 | Txlna | MGP_SPRETEiJ_P0023389 | MGP_SPRETEiJ_P0067180 | Syntaxin 11. | Taxilin alpha. | 0.526 |
Stx11 | Txlnb | MGP_SPRETEiJ_P0023389 | MGP_SPRETEiJ_P0023475 | Syntaxin 11. | Taxilin beta. | 0.526 |
Stx11 | Txlng | MGP_SPRETEiJ_P0023389 | MGP_SPRETEiJ_P0097049 | Syntaxin 11. | Taxilin gamma. | 0.526 |
Stx1a | Stx1b | MGP_SPRETEiJ_P0074004 | MGP_SPRETEiJ_P0085945 | Syntaxin 1A (brain). | Syntaxin 1B. | 0.818 |
Stx1a | Stx2 | MGP_SPRETEiJ_P0074004 | MGP_SPRETEiJ_P0073711 | Syntaxin 1A (brain). | Syntaxin 2. | 0.595 |
Stx1a | Stx3 | MGP_SPRETEiJ_P0074004 | MGP_SPRETEiJ_P0050231 | Syntaxin 1A (brain). | Syntaxin 3. | 0.946 |
Stx1a | Stx4a | MGP_SPRETEiJ_P0074004 | MGP_SPRETEiJ_P0085948 | Syntaxin 1A (brain). | Syntaxin 4A (placental). | 0.973 |
Stx1a | Txlna | MGP_SPRETEiJ_P0074004 | MGP_SPRETEiJ_P0067180 | Syntaxin 1A (brain). | Taxilin alpha. | 0.963 |
Stx1a | Txlnb | MGP_SPRETEiJ_P0074004 | MGP_SPRETEiJ_P0023475 | Syntaxin 1A (brain). | Taxilin beta. | 0.601 |
Stx1a | Txlng | MGP_SPRETEiJ_P0074004 | MGP_SPRETEiJ_P0097049 | Syntaxin 1A (brain). | Taxilin gamma. | 0.588 |
Stx1b | Stx1a | MGP_SPRETEiJ_P0085945 | MGP_SPRETEiJ_P0074004 | Syntaxin 1B. | Syntaxin 1A (brain). | 0.818 |
Stx1b | Stx2 | MGP_SPRETEiJ_P0085945 | MGP_SPRETEiJ_P0073711 | Syntaxin 1B. | Syntaxin 2. | 0.675 |
Stx1b | Stx3 | MGP_SPRETEiJ_P0085945 | MGP_SPRETEiJ_P0050231 | Syntaxin 1B. | Syntaxin 3. | 0.792 |
Stx1b | Stx4a | MGP_SPRETEiJ_P0085945 | MGP_SPRETEiJ_P0085948 | Syntaxin 1B. | Syntaxin 4A (placental). | 0.762 |
Stx1b | Txlna | MGP_SPRETEiJ_P0085945 | MGP_SPRETEiJ_P0067180 | Syntaxin 1B. | Taxilin alpha. | 0.709 |
Stx1b | Txlnb | MGP_SPRETEiJ_P0085945 | MGP_SPRETEiJ_P0023475 | Syntaxin 1B. | Taxilin beta. | 0.601 |
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