STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppp1r8Protein phosphatase 1, regulatory subunit 8. (351 aa)    
Predicted Functional Partners:
Ppp1ca
Protein phosphatase 1 catalytic subunit alpha.
   
 
 0.990
Ppp1cb
Protein phosphatase 1 catalytic subunit beta.
   
 
 0.820
MGP_SPRETEiJ_P0073223
annotation not available
   
 
 0.819
Dtymk
Deoxythymidylate kinase.
     
 0.689
Sf3b1
Splicing factor 3b, subunit 1.
   
 
 0.677
Ppp1r10
Protein phosphatase 1, regulatory subunit 10.
    
 
 0.672
Suox
Sulfite oxidase.
      
 0.655
Dhx9
DEAH (Asp-Glu-Ala-His) box polypeptide 9.
   
 
  0.631
Dnajc8
DnaJ heat shock protein family (Hsp40) member C8.
   
 
 0.603
Rbm5
RNA binding motif protein 5.
     
 0.593
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.