STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tnfrsf4Tumor necrosis factor receptor superfamily, member 4. (272 aa)    
Predicted Functional Partners:
Tnfsf4
Tumor necrosis factor (ligand) superfamily, member 4.
    
 0.999
Cd80
CD80 antigen.
      
 0.974
Tnfsf9
Tumor necrosis factor (ligand) superfamily, member 9.
      
 0.974
Cd70
CD70 antigen.
   
  
 0.963
Cd86
CD86 antigen.
      
 0.949
Icosl
Icos ligand.
      
 0.917
Tnfrsf9
Tumor necrosis factor receptor superfamily, member 9.
   
 
 0.876
Cd40
CD40 antigen.
   
  
0.852
Icos
Inducible T cell co-stimulator.
   
  
 0.830
Cd40lg
CD40 ligand.
      
 0.829
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.